You have followed the instruction mentioned in SAP Note ##2801600 - How to stop the Where-Used List. After that, only job EU_INIT is stopped from running, job EU_PUT and EU_REORG are still running.
Netweaver based systems
SAPRSEUB_STOP, RS_WHERE_USED_SWITCH_OFF, EU_INIT, EU_REORG, EU_PUT, wher-used index, where-used list, , KBA , BC-DWB-UTL , Workbench Utilities , Problem
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